Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 376 a.a., homocitrate synthase from Herbaspirillum seropedicae SmR1

 Score =  197 bits (501), Expect = 6e-55
 Identities = 121/352 (34%), Positives = 183/352 (51%), Gaps = 12/352 (3%)

Query: 5   VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIART 64
           V I DTTLRDGEQ    + + +EK+ IA AL+ +GV  ME+G P+    + E +Q IA  
Sbjct: 2   VTINDTTLRDGEQTAGVAFTAEEKIDIARALDEIGVPEMEIGIPIMGQAEIEVIQAIAAL 61

Query: 65  IKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMAVG 124
              S+     R  E D+ AAA+  +      ++  +  S IH++ KL+R  + VL     
Sbjct: 62  PLRSKTMVWGRMCEADLAAAARCNADI----VNLSMPVSDIHIQHKLQRDRDWVLAQIRH 117

Query: 125 AVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGSII 184
            +  A     +V    ED+ R  +D + R++E A  AGAR     DT+G   P     +I
Sbjct: 118 FLPKALDLGMEVCLGGEDSSRADLDFMLRVIETAQAAGARRFRFADTLGLLDPFATYEVI 177

Query: 185 QTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLEEI 244
           + L   V       + +H H+DLGL+ AN++ A+  GA  +  T+NG+GERAGN  LEE+
Sbjct: 178 RQLRQEV----DIELEMHAHNDLGLATANTLAAINAGASHVNTTVNGLGERAGNAPLEEV 233

Query: 245 AMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQDGM 304
            M L   ++L G ET ++ + +   S LV++     +  NK+IVG   FTH SGIH DG+
Sbjct: 234 VMGL---RHLHGIETQVDTRSLPAISRLVAKASGKAVAPNKSIVGEAVFTHESGIHVDGL 290

Query: 305 LKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDAL 356
           LK    YE  +P  +G   +++ +   SG   +K    +MG    D    A+
Sbjct: 291 LKNPANYEHFSPAELG-RSHHIVLGKHSGSRGVKDAFAKMGILLSDSQAQAM 341