Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 535 a.a., 2-isopropylmalate synthase from Dyella japonica UNC79MFTsu3.2

 Score =  429 bits (1103), Expect = e-124
 Identities = 235/501 (46%), Positives = 325/501 (64%), Gaps = 11/501 (2%)

Query: 3   NRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIA 62
           +RV IFDTTLRDGEQA    +  + KL++A ALE LGVDVME GFP +SP DF +V  IA
Sbjct: 20  DRVRIFDTTLRDGEQAPGFGMDRRAKLRMAHALEALGVDVMEAGFPQASPDDFAAVADIA 79

Query: 63  RTIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMA 122
           + +++S VCAL+R    DID A +AL  A+  RIH F+STS +H E KL  S +QV++ A
Sbjct: 80  KAVRHSTVCALARCQAADIDTAGRALEAAQHSRIHVFLSTSPLHREHKLGMSKQQVIDTA 139

Query: 123 VGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGS 182
           + AV+ AR    +VEFS EDA RT  D L  +  AAI AGA T+N PDTVGY  P+E   
Sbjct: 140 IAAVERARALCHEVEFSAEDAMRTEPDYLAEVFSAAIAAGATTVNAPDTVGYVTPAEIAE 199

Query: 183 IIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLE 242
               L   V   ++ + S HCHDDLG++VANS+ AV  GARQIECT+NGIGERAGN SLE
Sbjct: 200 RFAYLRKHVKGAERVVFSSHCHDDLGMAVANSLAAVSAGARQIECTINGIGERAGNASLE 259

Query: 243 EIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQD 302
           E+ M L  R    G ++ I+A+ + +TS L++QL    +  NKAIVG NAF H SGIHQ 
Sbjct: 260 EVVMALRVRGPYFGVDSRIDARRLVQTSRLLTQLTGQAVPRNKAIVGDNAFAHESGIHQH 319

Query: 303 GMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDALYEQFLH 362
           GMLK + TYEIM P+ +G+    L +   SGRH ++ R++ +G++ ++  +D ++ +F  
Sbjct: 320 GMLKHRGTYEIMRPQDVGMGETKLVLGKHSGRHALRSRLQALGHTPEEAAMDDIFARFKA 379

Query: 363 LADKKGQVFDYDLEALAFIEAQAAEDNFYQLRQLVVQSDSTE---GVATATVRI--EVGG 417
           LADKK ++ D DLEALA  +   A   +      +VQ +S+    G A+A+VR+  + G 
Sbjct: 380 LADKKREIHDEDLEALALGQDPDAAGPW-----RIVQLNSSSHLGGSASASVRLAHDDGR 434

Query: 418 EIKTEAATGNGPVDAAYNAIARATDRRIDIISYKLGAKGVGQDALGQVDITAVYHEQNFH 477
           EI  EAA G+GPVDA   A+ RAT   +++  +++ A   G DA GQ  +TA +  +N+ 
Sbjct: 435 EI-GEAAIGDGPVDAVLRAMERATGTDLELTQFQVRAVSEGGDAQGQAQLTARHAARNWR 493

Query: 478 GVGLATDVVEASARALVHVMN 498
           G G++TD+VEA+A A + ++N
Sbjct: 494 GNGVSTDIVEATALAALSIVN 514