Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 538 a.a., (R)-citramalate synthase (EC 2.3.3.21) (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  178 bits (451), Expect = 5e-49
 Identities = 150/536 (27%), Positives = 257/536 (47%), Gaps = 37/536 (6%)

Query: 1   MSNRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQT 60
           M  ++ ++DTTLRDG Q+   +L+  +KL+IA+ L+ LG+  +E G+P S+P D    + 
Sbjct: 1   MRRQIHLYDTTLRDGSQSEDINLNTPDKLKIALRLDELGIAYIEGGWPGSNPVDVAFFKE 60

Query: 61  IAR-TIKNSRVCALSRALEK----DIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSF 115
           I    +K +++ A           + D   +A++ A       F  +   H    L+   
Sbjct: 61  IRNYNLKQAKISAFGSTHHPSHTAENDPNLKAIAAARTDAAAIFGKSCERHAREALRLDG 120

Query: 116 EQVLEMAVGAVKYARRFTDDVEFSCE---DAGRTPIDNLCRMVEAAIHAGARTINIPDTV 172
            + L++   ++ + ++   +V F  E   D  R        ++  A  AG   + + DT 
Sbjct: 121 RRNLDIIHDSIAFLKKQVAEVFFDAEHFFDGYRHNAAYALEVLRRAHEAGGDVLVLCDTN 180

Query: 173 GYTVPSEFGSIIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGI 232
           G T+P E   I+  +  ++P   +A + +H H+D  ++VANSI AVQ GA Q++ TMNG+
Sbjct: 181 GGTLPHEVHDIVTAVREQLP---EAKLGIHAHNDCEVAVANSIAAVQAGAVQVQGTMNGV 237

Query: 233 GERAGNCSLEEIAMILATRK-NLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGAN 291
           GER GN +L  +  IL  +             +++   S+ VS++ N+P  S +  VG +
Sbjct: 238 GERCGNANLSSVIPILELKSAGAYACLPEGRLQQLTAVSSYVSEVTNLPPFSRQPFVGRS 297

Query: 292 AFTHSSGIHQDGMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDY 351
           AF H  G+H   + +    YE +TPES+G N   + +T  +GR  I       G+   D 
Sbjct: 298 AFAHKGGVHVSAVNRNATLYEHITPESVG-NHQRVLITELAGRSNIVSLARRFGF-HLDK 355

Query: 352 NLDALYEQFLHLADKKGQVFDYDLEALAFIE-------AQAAEDNFYQLRQLVV----QS 400
           +   +      L  K    +DY   A A +E       A+     F++L Q  V    Q 
Sbjct: 356 DEPVVKGLMNELKKKASLGYDY-AAAEASVELLLLRKLARRGVREFFKLIQFRVLESKQE 414

Query: 401 DSTEGVATATVRIEVGGEIKTEAATGNGPVDAAYNAIARATD------RRIDIISYKL-- 452
           +  E ++ A+V +EV G I+  AATG GPV+A  NA+ +A        R + ++ +K+  
Sbjct: 415 NDLEPMSEASVMVEVEGIIEHTAATGRGPVNALDNALRKALSSFYPRIREMRLLDFKVRV 474

Query: 453 --GAKGVGQDA-LGQVDITAVYHEQNFHGVGLATDVVEASARALVHVMNLTCRADK 505
             G +  G  A   +V I +   +  +  VG++ +++EAS +AL   M      D+
Sbjct: 475 LTGTETDGGTASTVRVLIESGDADSRWVTVGVSYNIIEASWQALADSMTYKLYKDE 530