Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 203 a.a., response regulator FixJ from Rhodopseudomonas palustris CGA009

 Score =  131 bits (330), Expect = 7e-36
 Identities = 68/189 (35%), Positives = 119/189 (62%), Gaps = 5/189 (2%)

Query: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEV 66
           ++++DDD A+ +S+ F+L   GY+V+ + S + FL   P  + GC++ D RMP I G ++
Sbjct: 6   VHVIDDDLAMRESIEFLLSSAGYEVKLYESAQTFL-DLPDVEFGCILSDVRMPGIDGLDL 64

Query: 67  QQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKESQAS 126
            ++     S L V+ +TGHGD+P+A+ A + GA DF +KP     L+  I+ A K++Q  
Sbjct: 65  LKRQKAAGSKLPVLIMTGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQEG 124

Query: 127 FEQQSLQHKFA----QLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLE 182
            + +++    A     L+ RE+QV+  ++ GM+NK I+    +S RTIEV+RA +M K++
Sbjct: 125 AKSEAVTQDIATRIQSLSPRERQVMDGLIAGMSNKVIAREFDISPRTIEVYRANVMTKMQ 184

Query: 183 VSNMAELVQ 191
            ++++ELV+
Sbjct: 185 ATSLSELVR 193