Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 199 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (396), Expect = 2e-43
 Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 4/195 (2%)

Query: 4   MLPLYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITG 63
           M  LYLVDDD+ +LDSL +ML   GY  QTF++   FL Q  L   G  ILD +MP + G
Sbjct: 1   MCNLYLVDDDQDVLDSLKWMLEGMGYAPQTFTNASCFLTQVDLHLPGVAILDIQMPGVDG 60

Query: 64  QEVQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKES 123
            E+ Q++ +  SPL VI LTGHG + MA+ A + GA DF +KP  G  L   +KKA   S
Sbjct: 61  IELLQQIKQQDSPLSVIMLTGHGTISMAVQALQHGAIDFLEKPADGDKLQALMKKASLMS 120

Query: 124 QASFEQQ----SLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMK 179
             +++ +    S+  + A LT REQQV+  V+ G  NK I+  + ++ RTIE+HR K+M+
Sbjct: 121 LDAYQHKEKASSVAQRIASLTPREQQVMHAVLAGKLNKVIAAELNIAQRTIELHRQKVMQ 180

Query: 180 KLEVSNMAELVQHLA 194
           K++V+N+AEL   +A
Sbjct: 181 KMQVNNVAELAYLMA 195