Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 196 a.a., LuxR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  123 bits (308), Expect = 3e-33
 Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 11/196 (5%)

Query: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLT-----QAGCVILDSRMPEI 61
           L++VDD+E I DSL ++ R        + SG   LA    +     +  C++LD RMP  
Sbjct: 2   LHIVDDEEIIRDSLAWLARSRNIAATAYDSGPTLLAALAASPGIDAEGECLLLDVRMPGT 61

Query: 62  TG----QEVQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIK 117
           +G     +++ K L  + P  VIFLTGHGD+PMA+   + GA DFF+KP +   L+  + 
Sbjct: 62  SGVALFNDLKTKGLLHRRP--VIFLTGHGDVPMAVDMLKNGAFDFFEKPFNDNQLMDRVL 119

Query: 118 KAHKESQASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKI 177
           +A   S+A   + ++Q + A L+ RE++VL  ++ G  NK I++ + +S+RT+EVHRA I
Sbjct: 120 EALASSRAGGAEDAVQSRLAALSVREREVLDLILAGKMNKVIADELGISMRTVEVHRAHI 179

Query: 178 MKKLEVSNMAELVQHL 193
             K+ V    EL + L
Sbjct: 180 FDKMNVKTAVELARLL 195