Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 214 a.a., LuxR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  154 bits (389), Expect = 1e-42
 Identities = 82/200 (41%), Positives = 130/200 (65%), Gaps = 10/200 (5%)

Query: 1   MSTMLPLYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLA-----QCPLTQAGCVILD 55
           ++T   +++VDDDEA+ DSL ++L   GY+VQ FSS   F+      Q P  Q  C+ILD
Sbjct: 5   VTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFIDAWQPHQHP-GQIACLILD 63

Query: 56  SRMPEITGQEVQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVS----GKA 111
            RM  ++G E+Q++L+   + L +IF+TGHGD+PMA+S  +KGA DF +KP       K 
Sbjct: 64  VRMSGMSGLELQERLIADNASLPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAELRKL 123

Query: 112 LVQAIKKAHKESQASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIE 171
           + + + KA  ES +  +Q++   +  +LT RE QVL  ++ G  NKQI++ + +S++T+E
Sbjct: 124 VERMLDKARSESTSVQQQRAAAERLGKLTAREHQVLERIIAGRLNKQIADDLGISIKTVE 183

Query: 172 VHRAKIMKKLEVSNMAELVQ 191
            HRA IM+KL V+ +A+L++
Sbjct: 184 AHRANIMEKLNVNTVADLLR 203