Pairwise Alignments

Query, 549 a.a., toxin secretion ABC transporter protein, HlyB family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (528), Expect = 8e-58
 Identities = 137/532 (25%), Positives = 270/532 (50%), Gaps = 11/532 (2%)

Query: 14  FTELLLSSTLINVLSLALPFTMLQIYDRILPNEAYGTASVLAIGVGIAILLELVLRYTRS 73
           + ++L++S LIN+ ++A P     +YD+++PN A+ T  VL+ G+ +  L + V +  RS
Sbjct: 154 YRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRS 213

Query: 74  WLLALNASNYELQTTAQFVDRLMKADYHHVEQLGSGKILHGITSIATMREIYSGQAAVAL 133
           + + +     ++  +++   ++M            G     +    ++RE ++     +L
Sbjct: 214 YFIDVAGKKSDILISSKLFSKVMGIRME-ARPPSVGAFARHLQEFESIREFFTSATISSL 272

Query: 134 MDFPFVIIFLALVAYIGGPLVFIPILVWGIAGIGVWQIGKKLSVATRELAISDDERTRLL 193
           +D PF ++FL L+  + G LV++P++   I  I  + I  +L  A  E +    ++   L
Sbjct: 273 IDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANL 332

Query: 194 ILVLSGLTTAKSLALESRITYAYKKINYQRLAQQNEVDWLSSQLQEWIQGASQATTLALV 253
           I  L+GL T K    + +  Y +++          +   ++  +Q       QA  + ++
Sbjct: 333 IESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMI 392

Query: 254 LIGCFEVLNGDLTTGGLAACSILAGRAVAPLSAIGSLKAKFVTAQSAMQDVNEIIASPPE 313
           ++G + + NGDLT GGL A ++L+GRA+ PL  +  L  ++  A+S+M  + ++++ P E
Sbjct: 393 IVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDE 452

Query: 314 SLNGTQVYQQKLPSGPIQFEQVSAQQTG---AKLKQINLTIPAGSLVTVTSNPLTHASLL 370
              G +   + +  G I+ ++V+        A ++ ++LTI  G  V +     +  + L
Sbjct: 453 QEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTL 512

Query: 371 LSTVGGYHQVTEGAIKIDSIPLTEHDPLEYRQSISYVSPWATLLAGSILDNLTLFR---H 427
              + G ++ TEG ++ID   +++   ++ R++I  V   + L  GSI DN+TL R    
Sbjct: 513 ERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSD 572

Query: 428 EREAYAMVLADKLGLSATIAQLPAGYQTLVGNNDSQMLNKGAIKLIAIVRALAQSPSILL 487
           +RE   M  A++ G++    Q PAG +  VG     +L+ G  + ++I RA    P +LL
Sbjct: 573 DRE--VMDAANRAGVTVFTQQDPAGLERQVGEG-GMLLSGGQRQSVSIARAFLGRPPVLL 629

Query: 488 LDEPMVSLDADSQQRLLALLLELKNHITLIVASYFTEIAAISDYRIHISSQG 539
           +DEP  ++D  S+  +   L +LK   TLI+ ++ T +  + D R+ +  +G
Sbjct: 630 MDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVD-RVIVMEKG 680