Pairwise Alignments

Query, 482 a.a., tldD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 473 a.a., protein TldD from Phaeobacter inhibens DSM 17395

 Score =  474 bits (1220), Expect = e-138
 Identities = 241/449 (53%), Positives = 319/449 (71%), Gaps = 6/449 (1%)

Query: 34  DFSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAYADDITPAALTAAV 93
           D  +++ +  + E+ V +DG +++ S+    G G+RA++GE  G+A++ D++ A L  A 
Sbjct: 30  DDGEIFVERRKSEALVFDDGRLRNASYDAAEGFGLRAVNGEVAGYAHSTDVSIAGLKRAA 89

Query: 94  EAARGIASAGEQTQVQAFKRQKALALYDSLDPIAAMEEVKKINLLKEADAFIRSLDSRII 153
           E AR     G  T      R     LY   DPI AM    K+  L+E DAF R+ D R++
Sbjct: 90  ETARLAVGDGGGTMAPPPPRTNT-RLYTDDDPIGAMPFAVKVETLREIDAFARAQDPRVV 148

Query: 154 QVVVSLAGVHEEILVAASDGTLAADIRPLVRFNCSVILEENGKRERGGAGGGGRHDYSVL 213
           QV   LA   +E+ +  +DGT   D+RP+ R N SVI+E++G+RE G AGGGGR     L
Sbjct: 149 QVSAMLAASLQEVEILRADGTRVRDVRPMTRLNVSVIVEQDGRRESGSAGGGGRVGLDGL 208

Query: 214 MVNDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMTVVLGNGWPGVLLHEAVGHGLEGD 273
           +   D    +     REA+R A VNL A+ APAGEM VVLG GWPG+LLHEA+GHGLEGD
Sbjct: 209 VDPADWQNKV-----REALRIACVNLEAVPAPAGEMDVVLGPGWPGILLHEAIGHGLEGD 263

Query: 274 FNRKGSSAFSGMVGQQVASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVLIEDGILKGY 333
           FNRKGSSAF+G++GQQ+A+K VTV+DDGTLA+RRGS+++DDEG  +Q+T LIEDG L G+
Sbjct: 264 FNRKGSSAFAGLMGQQIAAKGVTVLDDGTLADRRGSITVDDEGTPSQKTTLIEDGKLVGF 323

Query: 334 LQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTSGESEPSDIIKSVKKGIYAPNFG 393
           +QD+ NARLMGV  TGNGRR+SYAH PMPRMTNTYM  G++ P D++ S+K GI+A  FG
Sbjct: 324 MQDRQNARLMGVESTGNGRRQSYAHAPMPRMTNTYMLGGDANPDDLVASIKDGIWAVGFG 383

Query: 394 GGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMSQISMVGNDMALDKGVG 453
           GGQVDIT+GKFVFS +EAY +++G+V   +KGATLIG+G  A+++I  +GNDMALD G+G
Sbjct: 384 GGQVDITNGKFVFSCTEAYRVKDGKVGAPVKGATLIGDGATALNKIRALGNDMALDPGMG 443

Query: 454 VCGKDGQSVPVGVGQPTLKLDKLTVGGTA 482
            CGK GQ VPVGVGQPT+ +  LTVGG+A
Sbjct: 444 NCGKQGQWVPVGVGQPTVLMGGLTVGGSA 472