Pairwise Alignments

Query, 208 a.a., cytochrome c family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., cytochrome C553 from Herbaspirillum seropedicae SmR1

 Score =  101 bits (251), Expect = 1e-26
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 16/219 (7%)

Query: 1   MNNKIKTLAKGIALIS---GCALTSVAMANTSVIPPAG--------QICVSCHGVEGEGV 49
           +NNK+K  A  +  I     C+L + A    +   PA           C +CHG +G   
Sbjct: 24  LNNKVKGTAAIVLAIGVGMACSLAAAAAPEAAPAAPAAIAGMAERMAACTACHGKQGRAT 83

Query: 50  -EPLGPRLAGLSKEYITTQLQHFQAGVRQNATMMPMAMTLQGDGIEQVASYFSAKSPKTE 108
            +   PR+AG  + Y+  QLQ F+ G R+   M  +   L  D ++Q+A +F+ + P   
Sbjct: 84  ADGYYPRIAGKPEAYLLNQLQSFRDGQRRYPMMNYLLANLSDDYLQQIARFFADQHPPYP 143

Query: 109 VKPVLRGTHVTFSDDTARLAYQGDWSRGLPACVTCHGPSGLGG--DLFPRLAGQQASYIK 166
             P       T  +   RL  +GD  R LPAC  CH PS LGG     P L G    YI 
Sbjct: 144 -PPASNEASATVLERGRRLVTEGDPQRRLPACAACHAPS-LGGVQPGIPGLLGLPRDYIN 201

Query: 167 TQLLAWQAGTRKGDVDGMMANVANKLTAAEVDALANYFA 205
            QL AW+ G R       MA VA  L+  E++A +++ +
Sbjct: 202 AQLGAWRNGDRTAKTPDCMAAVARALSPEEINAASSWLS 240