Pairwise Alignments

Query, 208 a.a., cytochrome c family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 194 a.a., cytochrome c class I (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 88.2 bits (217), Expect = 9e-23
 Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 31/212 (14%)

Query: 1   MNNKIKTLAKGIALISGCALTSVAMANTSVIPPAGQ----ICVSCHGVEGEGVEPLGPRL 56
           M   + T+  G+ L  G    +VA       P AG+    +C +CHG++G    P+ P +
Sbjct: 1   MRQALITVLGGLMLAGGAPAPAVADD-----PVAGRKIANMCRTCHGLDGMAAIPIAPHI 55

Query: 57  AGLSKEYITTQLQHFQAGVRQNATMMPMAMTLQGDGIEQVASYFSAKSPKTEVKPVLRGT 116
            G  +EY+  QL  F+ G R +  M  +   L    I  VA++++A + +  +   ++  
Sbjct: 56  GGEPEEYLEAQLMAFKTGARVHEMMSVVTAGLSAQQISDVAAWYAAHAARATLPEGVQ-- 113

Query: 117 HVTFSDDTARLAYQGDWSRGLPACVTCHGPSGLGGDL-FPRLAGQQASYIKTQLLAWQAG 175
               ++D  +            ACV+CHG +G+   L  P LAG+   YI TQL A++ G
Sbjct: 114 ----AEDAPQ------------ACVSCHGANGISQLLDAPNLAGETNIYIDTQLKAYKRG 157

Query: 176 TRKGDVDGMMANVANKLTAAEVDALANYFANI 207
            R+ D+   M+ VA +L+ AE+  +A+++A I
Sbjct: 158 QRQHDI---MSEVAAELSDAEIREIADWYAAI 186



 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 34  AGQICVSCHGVEGEGVEPLGPRLAGLSKEYITTQLQHFQAGVRQNATMMPMAMTLQGDGI 93
           A Q CVSCHG  G       P LAG +  YI TQL+ ++ G RQ+  M  +A  L    I
Sbjct: 117 APQACVSCHGANGISQLLDAPNLAGETNIYIDTQLKAYKRGQRQHDIMSEVAAELSDAEI 176

Query: 94  EQVASYFSAKSPKTEV 109
            ++A +++A + + E+
Sbjct: 177 REIADWYAAITLEIEM 192