Pairwise Alignments

Query, 349 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., DMT family transporter from Ralstonia sp. UNC404CL21Col

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 16/269 (5%)

Query: 42  GLLFISVAVLFWGMLPIALKLSGSF-IDPVTLTWFRFLVALIVSILVQWSAGSLKQFAAL 100
           GLL  S   + +    I  KL   + +D V +   R L+A  + + + W      +   +
Sbjct: 19  GLLLASAGAVLFSAKAIVAKLMYRYQVDAVMVITLRMLLAAPLFMAMGWWQSRRAEPLTV 78

Query: 101 DAKVWLRLILAGL--FLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLN 158
             + W R++  GL  + + +++ F+  L Y+  G  +L    +P F+       FK R+ 
Sbjct: 79  PDR-W-RIVGLGLIGYYLSSFLDFL-GLQYITAGLERLILFLTPSFVLLITSTVFKRRIT 135

Query: 159 AIQLSCFASLALGMLMFFHPFLDFSATDNHEIWLGVMIVQFSALSWTTYALLQKSLLNRL 218
            +Q    A    G+++ F   L+     N+ +WLG  +V  SA+S+  Y L    L+ R+
Sbjct: 136 GLQWVSLALAYAGIVLVFAHDLNLG---NNNVWLGGGLVLASAVSYGIYLLASGELVKRV 192

Query: 219 SPANVLLVIYALGIFAMAPFSDFSQFAQMNS--FDWQVALFCAANTLIAYGCFGQSMKYW 276
              ++ LV YA+ +   A    F     M++    WQV    A N++        +M   
Sbjct: 193 --GSMRLVAYAMCVSTAACIVQFLVLRPMSALVLPWQVYGLSAINSVFC-TVAPVTMTMM 249

Query: 277 PTAQVSAMLALTPVFSFSATALVVSIGWW 305
             A+V A +A         + L+  +GWW
Sbjct: 250 AVARVGAPVASQAGMIGPVSTLL--LGWW 276