Pairwise Alignments

Query, 349 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., multidrug DMT transporter permease from Burkholderia phytofirmans PsJN

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 11/178 (6%)

Query: 41  LGLLFISVAVLFWGMLPIALKLS-GSFIDPVTLTWFRFLVALIVSILVQWSAGSLKQFAA 99
           + L   +V VL WG   IA+K   G+   PV++ W  ++ AL++  L++     +++   
Sbjct: 1   MNLFLYAVTVLIWGTTWIAIKWQLGAVPPPVSIAWRFWIAALVLFALLR----IMRRPIW 56

Query: 100 LDAKVWLRLILAGLFLM-LNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLN 158
                W  LI  GL L  LN++ F Y+   +  G   + F T+P   +  G LF    L 
Sbjct: 57  PPRAAWRFLIAQGLALFCLNFLCFYYAEQVVPSGLVAVVFSTAPLLNSINGRLFMGRPL- 115

Query: 159 AIQLSCFASLALGMLMFFHPFLD--FSATDNHEIWLGVMIVQFSALSWTTYALLQKSL 214
             Q +  A  ALG++     F+        +H  W G+ I     L ++   LL   +
Sbjct: 116 --QPTAIAGAALGLVGIVCLFVQQMTGHLGDHAAWFGLGIAFLGTLCFSAGNLLSSRM 171