Pairwise Alignments

Query, 349 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 329 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  624 bits (1609), Expect = 0.0
 Identities = 312/323 (96%), Positives = 321/323 (99%)

Query: 26  VNQSHSGPLANNHAQLGLLFISVAVLFWGMLPIALKLSGSFIDPVTLTWFRFLVALIVSI 85
           +NQSHSG LA NHAQLGLLFISVAVLFWGMLPIALKLSGSFIDPVTLTWFRFLVAL+VSI
Sbjct: 1   MNQSHSGSLATNHAQLGLLFISVAVLFWGMLPIALKLSGSFIDPVTLTWFRFLVALLVSI 60

Query: 86  LVQWSAGSLKQFAALDAKVWLRLILAGLFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFL 145
           LVQWSAGSLKQFAALDAKVWLRLILAGLFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFL
Sbjct: 61  LVQWSAGSLKQFAALDAKVWLRLILAGLFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFL 120

Query: 146 AFGGVLFFKERLNAIQLSCFASLALGMLMFFHPFLDFSATDNHEIWLGVMIVQFSALSWT 205
           AFGGVLFFKERLNA+QLSCFASLALGMLMFFHP+LDFSATDNHEIWLGVMIVQFSALSWT
Sbjct: 121 AFGGVLFFKERLNAVQLSCFASLALGMLMFFHPYLDFSATDNHEIWLGVMIVQFSALSWT 180

Query: 206 TYALLQKSLLNRLSPANVLLVIYALGIFAMAPFSDFSQFAQMNSFDWQVALFCAANTLIA 265
           TYALLQKSLLNRLSPANVLLVIYALGIFAMAPFSDFSQFAQM+SFDWQVALFCAANTLIA
Sbjct: 181 TYALLQKSLLNRLSPANVLLVIYALGIFAMAPFSDFSQFAQMDSFDWQVALFCAANTLIA 240

Query: 266 YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFRADELDALSLFGIGVI 325
           YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWP+VF+AD+LDALSLFGIGVI
Sbjct: 241 YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPDVFKADKLDALSLFGIGVI 300

Query: 326 IVSVMVVQLLPLYRQRRARRLQP 348
           IVSVMVVQLLP+YRQRRARRLQP
Sbjct: 301 IVSVMVVQLLPMYRQRRARRLQP 323