Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 202 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  160 bits (404), Expect = 2e-44
 Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 3/198 (1%)

Query: 15  LLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMTGLDTLNAMRQ 74
           ++R+G+  L+  + D  L GE G+G +A+      EPD++L+DLNM G+ GL+T   MR 
Sbjct: 1   MMRRGLRDLLELEDDLELIGEAGNGEEAIRLALEIEPDLILMDLNMPGIDGLETTRRMRD 60

Query: 75  EGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSGHRVISEEVAE 134
             + +RIV+ TVSD +  V+  LR GADGYLLKD + + L+++++   +G   +S E+ +
Sbjct: 61  ADIDARIVMFTVSDEQSHVLEALRNGADGYLLKDMDAEQLIEQIRIAATGRMALSPELTQ 120

Query: 135 YLYE---LKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTVKVHVKNLL 191
            L E   ++     Q   SSLT RE ++L+ +A+G SN+MI+  L I+EGTVKVHVKNLL
Sbjct: 121 VLAEAIRVRPKPSGQVQFSSLTKREKEVLRLIAKGQSNKMIARKLGITEGTVKVHVKNLL 180

Query: 192 RKANAKSRTEMAVRYLNN 209
            K   +SR E AV  L N
Sbjct: 181 HKLGLRSRVEAAVWVLEN 198