Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 213 a.a., two-component system regulatory protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  120 bits (302), Expect = 1e-32
 Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 16/203 (7%)

Query: 3   KPYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKG 62
           +P +VLVVDDHPLLR G+  ++ ++ D  + GE   G  A+       PD+VL+DL M  
Sbjct: 6   RPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMDLQMPR 65

Query: 63  MTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTM 122
           + G+  +  +RQ    +++++LT        +R L+AGA GYLLK      L+D +++  
Sbjct: 66  VDGVQAIQRIRQLDPMAKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDTIRDVR 125

Query: 123 SGHR-----VISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLH 177
            G R      ++E +A ++ +            +L+ RE ++L  +A G SN+ I   L 
Sbjct: 126 RGQRRHVPASVAENIAAHVLD-----------DALSARETEVLNLVATGCSNKQIGNALG 174

Query: 178 ISEGTVKVHVKNLLRKANAKSRT 200
           ISE TVK H+KN+L K   + RT
Sbjct: 175 ISEETVKAHMKNILCKLGVRDRT 197