Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 211 a.a., response regulator from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 6e-39
 Identities = 78/207 (37%), Positives = 124/207 (59%), Gaps = 4/207 (1%)

Query: 5   YSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMT 64
           +SVL+VDDHPLL +G+  +I + PDF + G   SG++A+S ++  +PDI +LD+ M GM 
Sbjct: 2   HSVLLVDDHPLLLRGLQDIIAAAPDFDVVGATASGVEAISLISGLQPDIAVLDVAMPGMG 61

Query: 65  GLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSG 124
           GL+ L A+R     +R++ LT + +   +   L+ G  G LLK+  P+ LLD ++    G
Sbjct: 62  GLEILRAIRNPRRLTRVIFLTATISGPQIAEALKMGLSGLLLKEYAPEALLDCMRRVAMG 121

Query: 125 HRVISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTVK 184
            + +  ++     ++ N A  + + S LTPRE +I   +  GLSNRMI+  L  SEGTV 
Sbjct: 122 GKWLPADLMANASQVSNDAPLERF-SLLTPREREISALICGGLSNRMIASRLGTSEGTVG 180

Query: 185 VHVKNLLRKANAKSRTEMA---VRYLN 208
           +H+ N+ RK +  +R  +A   V+Y N
Sbjct: 181 IHLHNIFRKLDISNRATLAALHVQYTN 207