Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 213 a.a., response regulator transcription factor from Dyella japonica UNC79MFTsu3.2

 Score =  125 bits (315), Expect = 4e-34
 Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 4/206 (1%)

Query: 6   SVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMTG 65
           SV +VDD  L+R+G+  L+    D  +  E   G  A+  +   +PD+VLLDL M  M+G
Sbjct: 3   SVCLVDDQNLVRQGVRSLLDLAEDIRVVAECADGAQAVQDIPRIKPDVVLLDLRMPNMSG 62

Query: 66  LDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSGH 125
           L+ L A+         +ILT  D  Q V++ L+AGA GYLLKD   + L++ ++   +G 
Sbjct: 63  LEVLQALSARNELPPTIILTTFDDDQLVLQGLKAGARGYLLKDVSLEQLVEAVRTVAAGG 122

Query: 126 RVISEEVAEYLY----ELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEG 181
            +++  V + L      ++N     E    LT RE +IL+ L+ G SN+ I+  L ++EG
Sbjct: 123 SLVAPMVTQRLLAGVGRMQNQFTSLEQPDPLTERETEILRLLSGGYSNKEIANSLKVAEG 182

Query: 182 TVKVHVKNLLRKANAKSRTEMAVRYL 207
           TVK HV N+L K   + RT   ++ L
Sbjct: 183 TVKNHVSNILSKLGVRDRTRAVLKAL 208