Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  394 bits (1012), Expect = e-115
 Identities = 201/209 (96%), Positives = 204/209 (97%)

Query: 1   MGKPYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNM 60
           MGKPYSVLVVDDHPLLRKGICQLI SDPDFSLFGEVG GLDALS+VATDEPDIVLLDLNM
Sbjct: 1   MGKPYSVLVVDDHPLLRKGICQLIASDPDFSLFGEVGGGLDALSAVATDEPDIVLLDLNM 60

Query: 61  KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN 120
           KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN
Sbjct: 61  KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN 120

Query: 121 TMSGHRVISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISE 180
            M GHRVIS+EV EYLYELKNAADEQEW+SSLTPRELQILQQLAEGLSNRMISEHLHISE
Sbjct: 121 AMLGHRVISDEVEEYLYELKNAADEQEWISSLTPRELQILQQLAEGLSNRMISEHLHISE 180

Query: 181 GTVKVHVKNLLRKANAKSRTEMAVRYLNN 209
           GTVKVHVKNLLRKANAKSRTEMAVRYLNN
Sbjct: 181 GTVKVHVKNLLRKANAKSRTEMAVRYLNN 209