Pairwise Alignments

Query, 228 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (436), Expect = 5e-48
 Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 5/215 (2%)

Query: 17  VVITSALIASGCTTV---NPYTNEQQTAKATTGALIGAVAGAAVGVASSSKS-DRGKGAL 72
           +++ + +  SGC      N  T E +T   T GAL+G +AGAAVG+A+   + +R K AL
Sbjct: 7   LLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERRKHAL 66

Query: 73  IGAASGAALGGGIGYYMDVQETKLRQQLASTGVSVTRSGDN-IILNMPNEVTFGVDQTEL 131
           IGAA GAA+GGGIGYY D QE +LR+ L  +GV V R G+N ++L M N + F  +  +L
Sbjct: 67  IGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSNSYQL 126

Query: 132 SDGAKRVLNSVALVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNYLMSKGVAS 191
                + L  VA +  EY  T L + G+TDS+GSD+ N  LS+ RA  V ++L+S+GVA+
Sbjct: 127 DSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQGVAA 186

Query: 192 ARVKSKGMGEASPIASNANAEGRAQNRRVEIVLTP 226
            R  ++G GE  P+ SN  AEGRA NRRVEI + P
Sbjct: 187 GRAIARGNGERFPLCSNNTAEGRACNRRVEIQILP 221