Pairwise Alignments

Query, 95 a.a., ribosomal subunit interface protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 118 a.a., sigma 54 modulation protein /SSU ribosomal protein S30P from Paraburkholderia bryophila 376MFSha3.1

 Score = 92.8 bits (229), Expect = 1e-24
 Identities = 45/100 (45%), Positives = 69/100 (69%), Gaps = 5/100 (5%)

Query: 1   MQIHLSGHHIEITESLRAYVEEKFSKLERHFEQINNVHVVLNVEK-----MQQIAEARIN 55
           M + +SGHH+E+T +LR YV  K  ++ RHF+Q+ +  VVL+V+       +Q  E  ++
Sbjct: 1   MNLQISGHHLEVTPALREYVITKLDRVLRHFDQVIDGSVVLSVDNHKEKDKRQKVEINLH 60

Query: 56  LTGGEVFATSEHADMYAAIDVLIDKLDRQVIKHKEKLTKH 95
           L G ++F  S  +D+YAAID++IDKLDRQVI+HK++L  H
Sbjct: 61  LKGKDIFVESCDSDLYAAIDLMIDKLDRQVIRHKDRLQGH 100