Pairwise Alignments

Query, 206 a.a., sodium-type flagellar protein MotX (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 204 a.a., sodium-type flagellar protein MotX (RefSeq) from Shewanella amazonensis SB2B

 Score =  264 bits (674), Expect = 1e-75
 Identities = 130/203 (64%), Positives = 162/203 (79%), Gaps = 2/203 (0%)

Query: 1   MLRTALFALLPLVSSMCFAETQAVDIYSQEQLLEMIRSEQYLAKVKQDECQLVQDIEARA 60
           MLR  LF++L ++ S     T+AVD+Y+QEQLL +IRSEQ+L +VKQD+CQLVQDIEA A
Sbjct: 1   MLR--LFSVLLMLVSPALMATEAVDVYTQEQLLSLIRSEQHLVRVKQDDCQLVQDIEAHA 58

Query: 61  EVLKQPLYQFLWGEMLNHGTCVKANAVKGMALLREAAEQGSPEAMVKLAEYYQTGKFVIR 120
           EVLKQPLYQFLWGEM  HG C+K +  +G+ LL++AA QGS EAM+++A YY+ GK+V++
Sbjct: 59  EVLKQPLYQFLWGEMFIHGVCIKKDVPRGLQLLKDAAGQGSTEAMLQVARYYEDGKYVLK 118

Query: 121 NKDRAVNYLLPAAASGSLAARMMLVRLYGEGYGSPRDYEMAYNWLYNNVFTDEATKKKAL 180
           NK R+V YL PAAA+G   ARMMLVRLY EG+GSPRDYEMAY+WLYN  F D+ TK +A 
Sbjct: 119 NKHRSVQYLYPAAANGDQKARMMLVRLYNEGFGSPRDYEMAYHWLYNEAFNDQKTKDQAW 178

Query: 181 SLLQVLAAKMPASAVARAQQEHL 203
            LLQ L + MPASAVARA+ EHL
Sbjct: 179 GLLQKLESMMPASAVARARGEHL 201