Pairwise Alignments

Query, 206 a.a., sodium-type flagellar protein MotX (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 565 a.a., Sel1 domain protein repeat-containing protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 34/97 (35%), Positives = 50/97 (51%)

Query: 69  QFLWGEMLNHGTCVKANAVKGMALLREAAEQGSPEAMVKLAEYYQTGKFVIRNKDRAVNY 128
           Q L G +  +G   + + ++G   L  AAE+G P+A   LAEY++ G     N++ A  +
Sbjct: 231 QALVGVLYTYGRGTRRDFMQGEKWLSLAAERGHPQACDLLAEYHRKGLAGPENQEEAFRW 290

Query: 129 LLPAAASGSLAARMMLVRLYGEGYGSPRDYEMAYNWL 165
              AAA G + AR  L   Y  G G+PRD   A + L
Sbjct: 291 TERAAALGVVRARFWLGVHYRYGMGTPRDDAKALHLL 327



 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 33/100 (33%), Positives = 49/100 (49%)

Query: 59  RAEVLKQPLYQFLWGEMLNHGTCVKANAVKGMALLREAAEQGSPEAMVKLAEYYQTGKFV 118
           RA  L     +F  G    +G     +  K + LLREAA+ G+P+AM  +AE    G+  
Sbjct: 293 RAAALGVVRARFWLGVHYRYGMGTPRDDAKALHLLREAADAGNPDAMGLVAEMLYRGQGS 352

Query: 119 IRNKDRAVNYLLPAAASGSLAARMMLVRLYGEGYGSPRDY 158
             +   +V Y    A +G L + + L  L+ EG G P+DY
Sbjct: 353 EPDMAGSVRYFQMGAKAGDLHSLLNLGILHHEGTGVPKDY 392



 Score = 37.7 bits (86), Expect = 4e-07
 Identities = 27/105 (25%), Positives = 46/105 (43%)

Query: 61  EVLKQPLYQFLWGEMLNHGTCVKANAVKGMALLREAAEQGSPEAMVKLAEYYQTGKFVIR 120
           E   +P  QF +   L  G   + +  +    L ++A+Q    A   LA  Y  G  V +
Sbjct: 151 EAPTRPQDQFAFAMALLQGADGQPDPARAATWLEKSADQDFGPAQDVLARLYLDGTGVRK 210

Query: 121 NKDRAVNYLLPAAASGSLAARMMLVRLYGEGYGSPRDYEMAYNWL 165
           ++ +A    + AA    + A+ ++  LY  G G+ RD+     WL
Sbjct: 211 DEAKAFALAMSAAEQDIINAQALVGVLYTYGRGTRRDFMQGEKWL 255