Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 300 a.a., hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] from Xanthomonas campestris pv. campestris strain 8004

 Score =  123 bits (309), Expect = 4e-33
 Identities = 81/241 (33%), Positives = 132/241 (54%), Gaps = 6/241 (2%)

Query: 7   IFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDEKAES 66
           ++GI+A++A+ K  P+ + +++L + R  +    L+    A     +V     L + A S
Sbjct: 61  LYGINAIQAVFKARPQALRKIYLTEARIPQ-FKALLAWCVAQRLGYRVVEEADLTKLASS 119

Query: 67  TQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLI-LDGVTDPHNLGACLRNADAAGVQG 125
           T H+GIVA V   ++  +   D L A    P L + LDGV +PHN GA LR++   GV G
Sbjct: 120 THHEGIVAEV--LRVPPQPLQDWLAALPQGPVLALWLDGVGNPHNFGAILRSSAHFGVAG 177

Query: 126 IIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADCELY 185
           +++P  +++GL+   ++VA G AE VPL Q+ + A+ M  L++ G  +  T  +   +++
Sbjct: 178 LLLPAGSTLGLSGTAARVAEGGAEAVPLVQLPDNAQAMAQLRQAGFAVAATLVDGGQDVF 237

Query: 186 QADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAVRQRR 245
              L   L   MGAE +G+ R     CD  +SI  SG V SLNV+ AT +  F+A  + R
Sbjct: 238 ATALPQRLVYVMGAESEGMDRQFASACDLQLSIHGSGLVESLNVASATAV--FQAAWRAR 295

Query: 246 S 246
           +
Sbjct: 296 A 296