Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 291 a.a., tRNA/rRNA methyltransferase from Sinorhizobium meliloti 1021

 Score =  115 bits (287), Expect = 1e-30
 Identities = 81/239 (33%), Positives = 120/239 (50%), Gaps = 12/239 (5%)

Query: 4   QDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSR--KVLD 61
           Q +++G+H V A L +   RII L + Q     RL      A  F T   +     ++L 
Sbjct: 57  QVLLYGLHTVRAALDNPERRIIRLSVTQNAA-ARLDLGDLTALPFPTETVMPQELDRILG 115

Query: 62  EKAESTQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLILDGVTDPHNLGACLRNADAA 121
             A    HQG++   +    L    L+ L    D P +L+LD VTDPHN+GA +R+A A 
Sbjct: 116 PDAI---HQGVMLETQP---LPHRKLEAL---RDCPLILVLDQVTDPHNVGAIMRSAVAF 166

Query: 122 GVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEAD 181
               +I    +S   + V++K A GA E +P  Q+TNLA T+  L E G   +G   E  
Sbjct: 167 DAGALITTMRHSPTESGVLAKSASGALELIPYIQITNLADTLEELHELGFMTIGLDSEGP 226

Query: 182 CELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEA 240
             L        +A+ +G+EGKGLR+ +R+    L  + M G++ SLNVS A  I ++ A
Sbjct: 227 QPLEGTFAGDKIALVLGSEGKGLRQKTRQTVKALARLDMPGAIKSLNVSNAAAIAMYAA 285