Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., RNA methyltransferase TrmH, group 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  124 bits (311), Expect = 3e-33
 Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 12/234 (5%)

Query: 7   IFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDEKAE- 65
           +FG HAVEA L++   + + L  L G  +             G +++   R+ ++     
Sbjct: 118 LFGRHAVEAALQNPERKALRLLALAGAAEG--------LPKGGPTVEPADREAIEAVVPP 169

Query: 66  STQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLILDGVTDPHNLGACLRNADAAGVQG 125
              HQG+  +V     L++  ++E+        + ILD V+DPHN+GA LR+A A G++ 
Sbjct: 170 GAVHQGLALKVAP---LSQPTVEEIARIPGPSVVAILDQVSDPHNIGAVLRSAAAFGIRA 226

Query: 126 IIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADCELY 185
           ++V   +S   T  ++K A G  E VPL +  NL++ +   +E G W  G    A+  L 
Sbjct: 227 VVVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTLA 286

Query: 186 QADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFE 239
           +A L     + +G+EG GLRRL R+ CD LV + M   V SLNVS A  +  +E
Sbjct: 287 EAALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYE 340