Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 245 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  242 bits (618), Expect = 4e-69
 Identities = 127/243 (52%), Positives = 164/243 (67%), Gaps = 3/243 (1%)

Query: 3   KQDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDE 62
           K  +IFG HAV + ++H    + E+++   R D R+  L+  AK     I     + L  
Sbjct: 2   KSKMIFGFHAVTSRIRHEASSVDEIYVDAERRDRRMLDLLHAAKEANVRIIQADDQRLAA 61

Query: 63  KAESTQHQGIVARVKAAKILAEHDLDELL-AKTDLPFLLILDGVTDPHNLGACLRNADAA 121
              + +HQG+VA  KAA +     LDELL A    P LLILDG+TDPHNLGACLR AD A
Sbjct: 62  MVGTRRHQGVVA--KAAALSLARTLDELLDAVVGPPLLLILDGITDPHNLGACLRVADGA 119

Query: 122 GVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEAD 181
           G   +I PKD +VGL A   KV+ GA++TVP   VTNLARTMR L+E+GVWI+GT+ +A+
Sbjct: 120 GAHAVIAPKDRAVGLNATAMKVSSGASDTVPYITVTNLARTMRDLKERGVWIIGTSDDAE 179

Query: 182 CELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAV 241
             LY+ D  GP A+ MG+EG+G+RRL+RE CD LV+IPM GSV SLNVSVA+G+CL+EA 
Sbjct: 180 KGLYEGDFTGPTALVMGSEGEGMRRLTRETCDVLVNIPMFGSVESLNVSVASGVCLYEAR 239

Query: 242 RQR 244
           RQR
Sbjct: 240 RQR 242