Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 248 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Dyella japonica UNC79MFTsu3.2

 Score =  237 bits (604), Expect = 2e-67
 Identities = 124/239 (51%), Positives = 164/239 (68%), Gaps = 1/239 (0%)

Query: 7   IFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDEKAES 66
           I GI+ VE  L +  ERI E+ +  G+ + R+  L  +AKA    +    R+ LD+ A  
Sbjct: 6   IVGINPVEGALSNDAERIREVLVENGQRNARVHELAERAKALRIPVHHRPREQLDKVAGE 65

Query: 67  TQHQGIVARVKAAKILAEHDLDELLAKTDLPFL-LILDGVTDPHNLGACLRNADAAGVQG 125
            +HQG+VAR +A  + +E DL ELL +     L L+LDGVTDPHNLGACLR+A AA V  
Sbjct: 66  ARHQGVVARYEAPPMASEGDLPELLEQAGAQALVLVLDGVTDPHNLGACLRSAAAAKVTA 125

Query: 126 IIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADCELY 185
           +IVPKD +VGLT VV + + G A+ VPL   TNLAR +R L++ GVWI G AGE +  +Y
Sbjct: 126 VIVPKDRAVGLTPVVRRASAGGADRVPLIAATNLARALRTLKDAGVWITGLAGETETSVY 185

Query: 186 QADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAVRQR 244
             DLKGP+A+ +G+EG+G+RRL+RE CD L  IPM G++ SLNVSVATG+ LFEA+RQR
Sbjct: 186 DIDLKGPVALVLGSEGEGMRRLTRETCDFLARIPMPGAMESLNVSVATGVVLFEALRQR 244