Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 247 a.a., 23S rRNA Gm-2251 2'-O-methyltransferase from Paraburkholderia bryophila 376MFSha3.1

 Score =  243 bits (619), Expect = 3e-69
 Identities = 123/245 (50%), Positives = 168/245 (68%), Gaps = 3/245 (1%)

Query: 1   MKKQDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVL 60
           M +  +++G HAV A ++H    + +++    R+D R+T  +  AK  G  +       L
Sbjct: 1   MARHKVLYGFHAVTARIRHDASTVEDVYYDATRKDRRMTEFLHVAKEAGVRLIAADETRL 60

Query: 61  DEKAESTQHQGIVARVKAAKILAEHDLDELLAKTD-LPFLLILDGVTDPHNLGACLRNAD 119
              A + +HQG+VAR  A  +    +L ELL   +  P +L+LDGVTDPHNLGACLR AD
Sbjct: 61  WGLAHTERHQGVVAR--AGDMPLAQNLAELLDGINGSPLILVLDGVTDPHNLGACLRVAD 118

Query: 120 AAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGE 179
           AAG   +I P+D +VGL A  +KVA GAA+TVP   VTNLAR +R L++ GVW+VGTAGE
Sbjct: 119 AAGAHAVIAPRDRAVGLNATAAKVASGAADTVPYITVTNLARALRELKDAGVWVVGTAGE 178

Query: 180 ADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFE 239
           A   LY+ +L GP+A+ MGAEG+G+RRL+R+ CD ++ IPM+G+V SLNVSVA+G+CLFE
Sbjct: 179 ASKSLYETELDGPVALVMGAEGEGMRRLTRDTCDVVMQIPMAGTVESLNVSVASGVCLFE 238

Query: 240 AVRQR 244
           AVRQR
Sbjct: 239 AVRQR 243