Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  205 bits (521), Expect = 4e-57
 Identities = 126/354 (35%), Positives = 206/354 (58%), Gaps = 1/354 (0%)

Query: 29  SLVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEG-DLSYQLDEKDAGVF 87
           +++ SG +   L +I + V+ +   + +IR +  +    + + E  DLS  +        
Sbjct: 184 NIMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEI 243

Query: 88  NSVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAM 147
            ++  + NRM      ++ ++   +  +  V+  +  ++E+    V EQ  +T++ A+AM
Sbjct: 244 GAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAM 303

Query: 148 TQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLA 207
            +M +TVQEV++NA  TA A+  A   +K G K+    ++ I  +  +I +   VI+ + 
Sbjct: 304 NEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVE 363

Query: 208 ADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATA 267
           +D+ SI  ++  I+ +AEQTNLLALNAAIE+ARAGE GRGFAVVADEVR LA RT ++T 
Sbjct: 364 SDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTE 423

Query: 268 EIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIAT 327
           EIQ  I  LQ G +  V+ M +    A   +  VE+A +SLG I T V +I +M+ QIAT
Sbjct: 424 EIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIAT 483

Query: 328 ASEEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRF 381
           A+E+Q AVAEEIN+NIS ++ +A   +     T+  S ++  ++ E+  L+ +F
Sbjct: 484 AAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQF 537