Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  205 bits (522), Expect = 3e-57
 Identities = 121/362 (33%), Positives = 210/362 (58%), Gaps = 2/362 (0%)

Query: 22  LLLYPLYSLVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEGDLSYQLDE 81
           L LY    ++  G LLA L    L  +++  +  + R L +L++AA  +  GDLS  +  
Sbjct: 180 LALYERNRVLNIGLLLALLIGGGLFAMVL--LRSISRPLEELKQAAASVAAGDLSRTIAC 237

Query: 82  KDAGVFNSVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTE 141
           +       V  SI +M + +  T+  +  ++  +   A ++  +++   QG+ +Q  + +
Sbjct: 238 RGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQ 297

Query: 142 LAATAMTQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKS 201
           +AATA+T+M + V EV+ NA  T+ A+  A+  A  G + +      I+ ++ ++ QT  
Sbjct: 298 MAATAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAG 357

Query: 202 VIEHLAADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKR 261
            +  LA +  SI  +++ I  +A+QTNLLALNAAIE+ARAGE GRGFAVVADEVRNLA+R
Sbjct: 358 TVTRLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQR 417

Query: 262 TSEATAEIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDM 321
           T  +T EI++ I A+Q   +Q V  M ++   A  +  M  +A ++LG I   V  I +M
Sbjct: 418 TQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEM 477

Query: 322 SHQIATASEEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRF 381
           +  IA+A+EEQ  VA E+++N+ A+ +++ ++A     T+++S ++  ++  +  L+ RF
Sbjct: 478 NLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRF 537

Query: 382 HV 383
            +
Sbjct: 538 RL 539