Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  215 bits (548), Expect = 3e-60
 Identities = 128/353 (36%), Positives = 203/353 (57%), Gaps = 1/353 (0%)

Query: 29  SLVTSGYLLATLCLIALAVILIFNINK-LIRHLRQLERAAHHLGEGDLSYQLDEKDAGVF 87
           S  + G L+  L  + +A+  ++ +N+ +I  +R L      L +G  + ++D   A   
Sbjct: 185 STASLGPLIMILASVVVALFSLWLVNRRIIEPIRSLIEHIARLSQGKFADRVDASRADEL 244

Query: 88  NSVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAM 147
             +  + N + + ++ T   L  ++  +   + ++  I+     G  EQ  +T+  ATAM
Sbjct: 245 GRLAVAANVLRDFLADTFTRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAM 304

Query: 148 TQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLA 207
            +M +T QEVS++AA  AQAAD A +SA+ G+ +M   +  I D++ +I  T  VI  L 
Sbjct: 305 HEMSATAQEVSRHAAEAAQAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLE 364

Query: 208 ADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATA 267
            D+  I  ++E I  +A+QTNLLALNAAIE+ARAG+ GRGFAVVADEVR LA+RT+E+TA
Sbjct: 365 GDSGRIGKVLEVIRGIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTA 424

Query: 268 EIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIAT 327
           EI Q I  +Q GA   V  +      +++    V +A   L  I   VE+I DM+ QIAT
Sbjct: 425 EIHQIIDTVQTGASNAVRAIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIAT 484

Query: 328 ASEEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHR 380
           A+EEQ AVAE+I++NI+ +  +A  N  +   T  +S  ++ +S ++  +  R
Sbjct: 485 AAEEQTAVAEDISRNITEITSIATINQQNVERTETASQNLHGLSAQLTEVTQR 537