Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 521 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (488), Expect = 3e-53
 Identities = 113/274 (41%), Positives = 167/274 (60%)

Query: 108 LIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQNAASTAQA 167
           L DT E +++ A     +S +  + + +Q  + + +ATA+ QM +T+QEV+ N  +TA A
Sbjct: 246 LADTGESVRQHAGRSAQLSLRQAESLDQQRSEADQSATAINQMAATIQEVTHNVQNTAHA 305

Query: 168 ADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLAADTNSISSIIETISQVAEQT 227
           A+ A   A+ G  +    +  I  M T +    + +  LA  T SI S+++ I+ +A+QT
Sbjct: 306 AEEADKLAQQGRGLADESLLAIRHMATSVTDIGNAVGELADATQSIGSVVDVITSIAQQT 365

Query: 228 NLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATAEIQQQITALQKGAQQGVEVM 287
           NLLALNAAIE+ARAGE GRGFAVVADEVR+LA RT  +T +IQQ IT+L+ GA + V+  
Sbjct: 366 NLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSTEQIQQIITSLRDGADRAVKTA 425

Query: 288 LKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIATASEEQHAVAEEINKNISAMA 347
            K   I+ E+   VE   K+L  I   V  IT MS Q+A+ASEEQ  VAE I++ I+ +A
Sbjct: 426 SKGEQISQESVASVEAVQKALDGISQSVTRITGMSQQMASASEEQSHVAETISQQITRIA 485

Query: 348 ELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRF 381
           +L  ++A      +  S ++  M+Q + SL  RF
Sbjct: 486 QLCDESASQAQQGSQISSELEEMAQYLHSLAERF 519