Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  205 bits (522), Expect = 3e-57
 Identities = 113/348 (32%), Positives = 209/348 (60%), Gaps = 3/348 (0%)

Query: 36  LLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEGDLSYQLDEKDAGVFNSVVHSIN 95
           ++A LC I LA+ L  +I   +  L++   AA  +  GDL++ ++         ++ ++ 
Sbjct: 197 VIAALCTIGLALWLTRSI---VGPLQRAVTAAEQVANGDLTHTIEVDGEDEVTRLLRALA 253

Query: 96  RMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAMTQMVSTVQ 155
            M  ++   +  +  ++  +   AT++ +++E + +G+ +Q  + + AATA+ +M S V+
Sbjct: 254 MMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMTSAVE 313

Query: 156 EVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLAADTNSISS 215
           EV++NA ST+ A++ +  SA  G   +   V  I  +T  +  T +++++LA  +  I  
Sbjct: 314 EVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQDIGK 373

Query: 216 IIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATAEIQQQITA 275
           +++ I  +AEQTNLLALNAAIE+ARAGE GRGFAVVADEVR LA RT ++T EI   ++A
Sbjct: 374 VLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSMVSA 433

Query: 276 LQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIATASEEQHAV 335
           ++ G+ Q ++ M  +   AD T  + + A +SL EI + +  I++ +  IA+A+EEQ  V
Sbjct: 434 MRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEEQAQV 493

Query: 336 AEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRFHV 383
           + E+++NI  + +L++++    N  + SS ++  ++ ++  ++ RF V
Sbjct: 494 SREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRFKV 541