Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  209 bits (532), Expect = 2e-58
 Identities = 125/354 (35%), Positives = 202/354 (57%), Gaps = 2/354 (0%)

Query: 30  LVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEGDLSYQLDEKDAGVFNS 89
           ++ S +L+A L + ALA  +I N+  ++  LR   + A  + +GDL++            
Sbjct: 268 MLLSVWLIAALIMSALAAWVITNL--IVGPLRDTLKLAERVADGDLTHNQVVTRKDELGQ 325

Query: 90  VVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAMTQ 149
           +  S+ RM  ++   I  L D    +   A  +  ++EQ   GV  Q+ +T+  ATAM +
Sbjct: 326 LQGSMMRMTGNLRELIGGLRDGVTQIASAAEQLSAVTEQTSAGVNSQKNETDQVATAMHE 385

Query: 150 MVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLAAD 209
           M +TVQEV++NA   + AA  A   A+ GD ++   V +I  + T++  +KS ++ L  +
Sbjct: 386 MSATVQEVARNAEQASHAAVNASKEAREGDGVVSKAVAQIEKLATEVTHSKSAMDDLKNE 445

Query: 210 TNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATAEI 269
           +N I  +++ I  VAEQTNLLALNAAIE+ARAGE GRGFAVVADEVR+LA+RT  +T EI
Sbjct: 446 SNKIGGVLDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQTSTEEI 505

Query: 270 QQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIATAS 329
              I+ L     Q   ++  +  +   +  +   A  S+  +   + +I  M+HQIA A+
Sbjct: 506 AALISGLHTRTAQVATILDNSQALTANSVELTRNAGVSINNMTQAISTIETMNHQIAAAA 565

Query: 330 EEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRFHV 383
           EEQ AVAEEIN+++  + +++ + A  +  T  SS+++  +   + SL+ RF V
Sbjct: 566 EEQSAVAEEINRSVLNVRDISEQTASASEETAASSVELARLGVHLQSLVSRFRV 619