Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (501), Expect = 1e-54
 Identities = 113/359 (31%), Positives = 205/359 (57%), Gaps = 4/359 (1%)

Query: 29  SLVTSGYLLATLCLIALAVILIFNINKLIRHLR----QLERAAHHLGEGDLSYQLDEKDA 84
           S   S   +A   ++ + +++++  + +IR+++     + R    L   DL+ +      
Sbjct: 294 SSAQSSLYVAVAIVVLMLIVVLWLASVIIRNIKVAVVDVNRTLMALSTRDLTARTRYIGK 353

Query: 85  GVFNSVVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAA 144
             F  +  +++ M   +S  I  +   +  +   A     ++ Q  Q V +Q + T+  A
Sbjct: 354 DEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVA 413

Query: 145 TAMTQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIE 204
           TA+++M +TV++V+++    A+ +    +S   G   + + +  I +++ Q  +T  +I+
Sbjct: 414 TAISEMSATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSRIID 473

Query: 205 HLAADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSE 264
            L  ++NSISS+++ I  VA+QTNLLALNAAIE+ARAGE GRGFAVVADEVRNLAK+T +
Sbjct: 474 ELKGESNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQD 533

Query: 265 ATAEIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQ 324
           +T  IQ+ I  LQ G+++    M + +  A E A  V +A + L EI   + +I+D + Q
Sbjct: 534 STVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDRNIQ 593

Query: 325 IATASEEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRFHV 383
           +A+A+EEQ  VAEEI++N+  +  L ++ +     T ++S ++  ++++   L+ RF V
Sbjct: 594 VASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQGLVGRFKV 652