Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (527), Expect = 1e-57
 Identities = 121/354 (34%), Positives = 204/354 (57%), Gaps = 3/354 (0%)

Query: 33  SGYLLATLCLIALAVILI---FNINKLIRHLRQLERAAHHLGEGDLSYQLDEKDAGVFNS 89
           S  +L+++  +AL + L+       ++   L+Q   AA  + +GDLS  +          
Sbjct: 293 SSAMLSSVAGLALLIGLLAAWIMTRQITVPLQQTLSAAARIAQGDLSRDISVTRRDEMGQ 352

Query: 90  VVHSINRMGEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTELAATAMTQ 149
           +  S+  M   +   +  + +    +   A  +  +++Q   GV  Q+ +T+  ATAM +
Sbjct: 353 LQGSMQTMTVSLRELVGGISEGVSQIASAAEQLSAVTKQTCIGVTSQKDETDQVATAMNE 412

Query: 150 MVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKSVIEHLAAD 209
           M +TVQEV++NA   +QAA  A   A+ GD+++G  + +I  +  ++  +   +  L  +
Sbjct: 413 MAATVQEVARNAQEASQAAAQADQQARSGDEVVGQAITQIEQLAREVLNSTQSMSALKQE 472

Query: 210 TNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKRTSEATAEI 269
           +N I  +++ I  V++QTNLLALNAAIE+ARAGE GRGFAVVADEVR LA+RT ++T EI
Sbjct: 473 SNKIVGVLDVIKSVSQQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEI 532

Query: 270 QQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDMSHQIATAS 329
           ++ I ALQ G QQ    +  + T+ D T  +  +A  +L +I   V +I  M+ QIATAS
Sbjct: 533 EELIAALQTGTQQVATTLDSSRTLTDNTVELSRRAGGALEQITRTVATIQHMNEQIATAS 592

Query: 330 EEQHAVAEEINKNISAMAELALKNAHHTNLTNLSSLKVYNMSQEIGSLLHRFHV 383
           EEQ  VAE+IN+N+ ++ +++ + A  +  T  SS+++  +   + +L+ +F V
Sbjct: 593 EEQSVVAEQINRNVISVRDISEQTAAASEQTAASSVELARLGTHLQTLVGKFRV 646