Pairwise Alignments

Query, 529 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  192 bits (488), Expect = 3e-53
 Identities = 123/347 (35%), Positives = 193/347 (55%), Gaps = 17/347 (4%)

Query: 29  SLVTSGYLLATLCLIALAVILIFNINKLIRHLRQLERAAHHLGEGDLSYQLDEKDA---G 85
           S + +G L+A + L  +A+I+I  ++ ++R  ++L      LG+GDLS  +  + A   G
Sbjct: 188 SWLVAGLLIAAIILGTIALIMIL-LSGVVRPAQKLTSQISRLGDGDLSDPVTMQRADELG 246

Query: 86  VFNSVVHSINRM----GEDVSRTILSLIDTSEWMKKVATDIKTISEQAKQGVLEQERQTE 141
                  S++R     G  +S     L DT E +++ A  + + S+ A Q +       E
Sbjct: 247 QLADAARSLHRFLSDTGSQLSENARQLNDTGELIRQNADSVVSQSDLAHQRI-------E 299

Query: 142 LAATAMTQMVSTVQEVSQNAASTAQAADIAQNSAKHGDKIMGHIVNKINDMTTQIHQTKS 201
             ATAM +M +T ++V+ +AAS A       +     D  +   V+ +  +T QI  +  
Sbjct: 300 QIATAMNEMSATAEDVASHAASVATEVSQTSDETATADSQINKAVDSMRRLTDQIRNSAE 359

Query: 202 VIEHLAADTNSISSIIETISQVAEQTNLLALNAAIESARAGEHGRGFAVVADEVRNLAKR 261
            +  LA D   +  +++ I ++A+QTNLLALNAAIE+ARAG+ GRGFAVVADEVRNLA +
Sbjct: 360 TVNQLANDGKKVGDVMQVIREIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLAAK 419

Query: 262 TSEATAEIQQQITALQKGAQQGVEVMLKNVTIADETALMVEQAHKSLGEIVTHVESITDM 321
           T EAT EI Q I A+   ++   E M  +  +A E++  VE    +L EI   + SI D 
Sbjct: 420 TQEATVEIDQIIGAISGASRDATEFMQASGVVAQESSEAVEAVRATLAEINRRMGSINDA 479

Query: 322 SHQIATASEEQHAVAEEINKNISAMAEL--ALKNAHHTNLTNLSSLK 366
           + Q+ATA+EEQ +V E+IN+N++ +AE   A+  A   NL  +  L+
Sbjct: 480 TTQVATAAEEQTSVCEDINRNVTDVAETSEAMHQAAENNLRTVPELE 526