Pairwise Alignments

Query, 310 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., tyrosine recombinase XerC from Burkholderia phytofirmans PsJN

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 52/308 (16%)

Query: 1   MTTATAYALYLS------RLAPNSQRSIASQMRSIAQLMDWPDEVIGKQLSSINYQQAMQ 54
           MT A   A YLS      RL+ ++ R  A ++  + QL        G+ L S+     + 
Sbjct: 1   MTAADPIAAYLSNLEHERRLSAHTLRGYAHELEELKQLAK------GRPLESLT---PVD 51

Query: 55  IRALLIHEQ---WSARSINRAMTAIKSIVKVAALMGEADMQQVAHINSIANMKHGAHQGN 111
           IR  +        +ARSI+  ++A ++  +  A  G  D+      N +A ++    Q  
Sbjct: 52  IRGAVSRAHAGGLTARSISHRLSAWRAFYRWLA--GRVDLAA----NPVATVR-APKQAK 104

Query: 112 PL----SAEQVTKLLALLSKRQDTYGLRTLAIFALFLGTGLRRSELAALT--LADYDSAT 165
           PL    S +  T+L+          GLR  A+  LF  +GLR +EL  L    AD D   
Sbjct: 105 PLPKALSVDDATRLMES-PPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYR 163

Query: 166 ST--IKV------VAGKGNKSRILFLPDWVEQHVIAWLNVRKMQLG----PLICHCRTTG 213
           S   +K+      V GKGN+ R++ +     + + AWL VR   +     PL    R   
Sbjct: 164 SAGWLKLDSAEVEVLGKGNRRRVVPVGSKALEALGAWLAVRDQMVKHDPHPLFLSARGNR 223

Query: 214 IIVHYRPVSRDALYRLVKDKLGDIGV-VGASPHDLRRTFITRLLEQNVDINTVRQMAGHA 272
           +       S + +   VK      G+     PH LR +F T +L+ + D+  V+++ GHA
Sbjct: 224 L-------SPNVVRERVKRAALVAGIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHA 276

Query: 273 DISTTTIY 280
            I+ T +Y
Sbjct: 277 SITATQVY 284