Pairwise Alignments

Query, 415 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 412 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  677 bits (1746), Expect = 0.0
 Identities = 332/413 (80%), Positives = 374/413 (90%), Gaps = 2/413 (0%)

Query: 1   MASTALVTNDAVALGILATILGFVFYTSSSSHPFWQKFYRFIPALLLCYFLPSLLNTFGV 60
           M +  LVTNDA  LG LA ILGFVFYT S  HP WQKFY+F+PALLLCYFLPSLLNTFG+
Sbjct: 1   MTTAPLVTNDATVLGFLAIILGFVFYTHS--HPSWQKFYKFVPALLLCYFLPSLLNTFGI 58

Query: 61  IDGDTSQLYQVASRYLLPACLVLLILSVDLKAILGLGPKAVIMFLTGTIGIVIGGPIALL 120
           +DG +SQLY VA+RYLLPACLVLLILSVDLKAI+GLGPKAV+MFL GT+GIVIGGP+ALL
Sbjct: 59  VDGHSSQLYFVATRYLLPACLVLLILSVDLKAIMGLGPKAVVMFLCGTLGIVIGGPVALL 118

Query: 121 TVSFIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQAAMKEIYEVGGNIFSVMVTVDVIV 180
            VS I+PSL    GPD+VWRGMTTLAGSWIGGGANQAAMKEIYEVGG++FSVM+TVDVIV
Sbjct: 119 LVSAIDPSLTNDMGPDSVWRGMTTLAGSWIGGGANQAAMKEIYEVGGSVFSVMITVDVIV 178

Query: 181 ANIWMAVLLFLASKAKEIDAKTGADTTAIDTLKNKVEQYHAENARIPSLRDLMLIVAVGF 240
           AN+WMAVLLF+AS+AKEIDAKTGADT+AI+ LK KVE+Y AEN R PSL DLMLI+AVGF
Sbjct: 179 ANVWMAVLLFMASRAKEIDAKTGADTSAIEALKEKVEKYKAENERNPSLTDLMLILAVGF 238

Query: 241 GITGVAHIAADFLGPYFEANYPWTEDYSFTSKFFWLVVIVTTIGLAMSFSPMRHLEAAGA 300
           G+TG AHIAADFL P+F  ++PWT+ YS TS FFWLVV+VTT GLA+SF+P+RHLEAAGA
Sbjct: 239 GVTGFAHIAADFLAPFFSEHFPWTKQYSLTSGFFWLVVLVTTAGLALSFTPLRHLEAAGA 298

Query: 301 SKVASAFLYILVATIGLHMDVSKVLDTPIYFLVGIIWMIVHASFMFLIAKLIKAPLFYMA 360
           SKVAS+FLY+LVATIGLHMDVS++L TPIYFL+GI WM+VHA FM L+AKLIKAPLFYMA
Sbjct: 299 SKVASSFLYVLVATIGLHMDVSEILKTPIYFLLGITWMLVHAGFMLLVAKLIKAPLFYMA 358

Query: 361 VGSQANVGGAASAPVVAAAFHPALAPVGVLLAVFGYVLGTYMAWICGQILQLV 413
           VGSQANVGGAASAPVVAAAFHP+LAPVGVLLAVFGY LGTYMAW+CGQ+LQLV
Sbjct: 359 VGSQANVGGAASAPVVAAAFHPSLAPVGVLLAVFGYALGTYMAWLCGQLLQLV 411