Pairwise Alignments

Query, 161 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 163 a.a., YajQ family cyclic di-GMP-binding protein from Rahnella sp. WP5

 Score =  201 bits (511), Expect = 5e-57
 Identities = 101/163 (61%), Positives = 126/163 (77%), Gaps = 2/163 (1%)

Query: 1   MPSFDIVSEVDEVELRNAVENSRRELSGRFDFRGKDASIDY--KDHVVTLTAEDDFQCKQ 58
           MPSFDIVSE+D  E+RNAVEN+ REL  R+DFR   AS D   K+  + + +E DFQ  Q
Sbjct: 1   MPSFDIVSEIDMQEVRNAVENASRELQTRWDFRNIPASFDLNEKNESIKVASESDFQVNQ 60

Query: 59  LVDILRTQLSKRNVEPSTMDVDEKSVHSGKTFSLKVRFKQGIETDIAKKIVKMVKDSKIK 118
           LVDILR +L+KR +E   +++ E+  HSGKT+S+  +   GIE+ +AKKIVK++KDSKIK
Sbjct: 61  LVDILREKLAKRGIEGGALEIPEQMEHSGKTYSVDAKLHSGIESALAKKIVKLIKDSKIK 120

Query: 119 VQSQIQGDTVRVTGKARDDLQAVMALVRQADLGQPFQFNNFRD 161
           VQ+Q+QGD VRVTGKARDDLQAVMAL+R  DLGQPFQF NFRD
Sbjct: 121 VQAQVQGDEVRVTGKARDDLQAVMALIRNGDLGQPFQFKNFRD 163