Pairwise Alignments

Query, 161 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 163 a.a., putative nucleotide-binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  122 bits (305), Expect = 4e-33
 Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 2/162 (1%)

Query: 1   MPSFDIVSEVDEVELRNAVENSRRELSGRFDFRGKDASIDYK--DHVVTLTAEDDFQCKQ 58
           MPSFD+V++V+  EL NAV N ++E+  R+DFR     I+    D  + L A D+ + + 
Sbjct: 1   MPSFDVVNKVEMQELDNAVNNVKKEVDTRYDFRNSVTEIELHRGDKRIHLLAGDEMKMRA 60

Query: 59  LVDILRTQLSKRNVEPSTMDVDEKSVHSGKTFSLKVRFKQGIETDIAKKIVKMVKDSKIK 118
           L D+L++   +R V+P  ++  +    S       V  ++GI  D+A+KIVK +KDSK+K
Sbjct: 61  LQDMLQSHCIRRKVDPKCLEFKDIEPTSKGQVKRDVVIQEGITKDVAQKIVKKIKDSKLK 120

Query: 119 VQSQIQGDTVRVTGKARDDLQAVMALVRQADLGQPFQFNNFR 160
           VQ+ IQ D VRVTGK  DDLQ V+ L+R  + G P QF N +
Sbjct: 121 VQAAIQDDQVRVTGKKIDDLQEVIQLLRGEEFGVPLQFVNMK 162