Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 461 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Ralstonia sp. UNC404CL21Col

 Score =  561 bits (1447), Expect = e-164
 Identities = 281/459 (61%), Positives = 346/459 (75%), Gaps = 9/459 (1%)

Query: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60
           MH+HILGICGTFMGG+AL+AR  GHRVTG DANVYPPMSTQLE QGIELI+GFDP QL  
Sbjct: 1   MHIHILGICGTFMGGIALIARQAGHRVTGCDANVYPPMSTQLEAQGIELIEGFDPEQLSV 60

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
                D+ VIGN +SRGNP +EA+L+  +PY SGPQ+L D++L ++WVLAV+GTHGKT+T
Sbjct: 61  GA---DLYVIGNVISRGNPLMEAILDRNLPYISGPQWLGDNVLRQKWVLAVAGTHGKTTT 117

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180
           +SMLAWIL+D GY P FL+GGVP+NFG+SARL ES FFV+EADEYD+AFFDKRSKFVHY 
Sbjct: 118 TSMLAWILQDAGYNPSFLVGGVPRNFGLSARLTESDFFVIEADEYDTAFFDKRSKFVHYR 177

Query: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240
           PRT ++NNLEFDHADIF DLAAI+ QFHH +RTVPGQG+++      ++ + ++ GCWSE
Sbjct: 178 PRTAILNNLEFDHADIFLDLAAIETQFHHLVRTVPGQGRLLVNGREDSLTRVLERGCWSE 237

Query: 241 QETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARHV 300
            E +  +E  +GW    L +D   F+V F+GQ+QG + WAL G HN  NAV AIAAARHV
Sbjct: 238 VERF-GTEDGEGWKIANLGED-DSFDVVFNGQAQGRVRWALQGDHNRMNAVAAIAAARHV 295

Query: 301 GVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQTKIT 360
           GV P+ AI++LARF   KRR+E+  TVNGV+VYDDFAHHPTAI TTI G+R  VGQ +I 
Sbjct: 296 GVPPAQAIESLARFENVKRRMEVRGTVNGVTVYDDFAHHPTAIRTTIDGLRRHVGQGRIL 355

Query: 361 IVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQA----DTIDWNMKEAMEAAVIPVTVLH 416
            VLEPRSNTMK GV K  L  S+  AD+ F Y A    D I W++  A+           
Sbjct: 356 AVLEPRSNTMKLGVMKQALPESLSGADQVFAYGAANGRDAIGWDLAGALAPLGARANTFS 415

Query: 417 QIDDVVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALA 455
            +  +V  V A+A+PGD ++VMSNGGFGG+H+KLL ALA
Sbjct: 416 DLTALVDAVTAAARPGDHVLVMSNGGFGGVHQKLLDALA 454