Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 464 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Burkholderia phytofirmans PsJN

 Score =  526 bits (1355), Expect = e-154
 Identities = 271/464 (58%), Positives = 334/464 (71%), Gaps = 14/464 (3%)

Query: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60
           MH+HILGICGTFMGGLA+LAR  GH VTG DA VYPPMSTQLE QGI LI+G+D  QL  
Sbjct: 1   MHIHILGICGTFMGGLAVLARGAGHTVTGCDAGVYPPMSTQLEAQGIGLIEGYDADQLN- 59

Query: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120
            G   D+ VIGN +SRGNP +EA+L+ G+PYTSGPQ+L +H+L  +WVLAV+GTHGKT+T
Sbjct: 60  -GLNADLFVIGNVVSRGNPLMEAILDRGLPYTSGPQWLGEHVLNGKWVLAVAGTHGKTTT 118

Query: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180
           SSML W+LED G  PGFLIGGVP NFGVSARL +S+FFV+EADEYD+AFFDKRSKFVHY 
Sbjct: 119 SSMLTWLLEDAGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYR 178

Query: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240
           P+T V+NNLEFDHADIF DL AI+ QFHH IRTVPG G+V+      A+++ +  GCWSE
Sbjct: 179 PKTAVLNNLEFDHADIFPDLGAIETQFHHLIRTVPGIGRVVTNGREDALERVLTRGCWSE 238

Query: 241 QETYHSSEVTKGWHAKALSDDC---HEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAA 297
            E +    V  GW      D       F V+ +    GV++W + G+HN  NA+ AIAAA
Sbjct: 239 VERF---GVQGGWQTLPAEDGVPVDERFAVYHNSARVGVVEWQVQGEHNRMNALAAIAAA 295

Query: 298 RHVGVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQ- 356
           RHVGV P+ A  +LA F   KRR+E+  +V+GV+VYDDFAHHPTAI TT+ G+RA+VG+ 
Sbjct: 296 RHVGVPPAQAARSLASFRNVKRRMEVRGSVDGVTVYDDFAHHPTAIDTTVAGLRARVGRH 355

Query: 357 -TKITIVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQA----DTIDWNMKEAMEAAVIP 411
            T+I  VLEPRSNTMK GV K  L  S+  AD  F Y A    D + WN+ EA+      
Sbjct: 356 NTRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDALGWNLGEALAPLGGK 415

Query: 412 VTVLHQIDDVVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALA 455
                 +D +V  V  +A+PGD I+VMSNGGFGG+H++LL AL+
Sbjct: 416 AQAFDNLDALVKAVVHAARPGDQILVMSNGGFGGVHQRLLDALS 459