Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 262 a.a., ABC transporter permease from Ralstonia sp. UNC404CL21Col

 Score =  189 bits (480), Expect = 5e-53
 Identities = 101/253 (39%), Positives = 151/253 (59%), Gaps = 6/253 (2%)

Query: 6   FIAFKSILTKEINRFTRIWVQTLVPPAITMTLYFLIFGNLVGSRIGEMGGVSYMEFIAPG 65
           ++ F+++L KE+ RF ++  QT+  P +T  LY LIFG+++  R+     +SY  F+ PG
Sbjct: 12  WVGFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDRVKVFDQLSYTAFLVPG 71

Query: 66  LIMMSVITNSYSNVASSFYSAKFQRNLEELMVAPVPHYVMIAGYVGGGVARGLCVGLIVT 125
           L+MMSV+ N+++N +SS   +K   NL  +M+ P+ H+ M   YV   + RGL VG  V 
Sbjct: 72  LVMMSVLQNAFANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVCASIIRGLAVGTGVL 131

Query: 126 LVAMFFVDISLHHA---GLVVMTVFLTSVLFSLGGLINAVFAKSFDDISIIPTFVLTPLT 182
           +V   F    LH A    ++V  V   SVL +L GLI  ++A+ FD ++    F++ P T
Sbjct: 132 VVTTLFA--HLHFAQPLWIIVFAVLGASVLGTL-GLIAGIWAEKFDQLAAFQNFLIVPAT 188

Query: 183 YLGGVFYSLSLLPAFWQGVSALNPVVYMINVFRYGFLGFADISVPLSIGIMVGFCAALWG 242
           +L GVFYS+  LP FWQ VS  NP  YMI+ FRYGF G +D+ V  S+G+M+     + G
Sbjct: 189 FLAGVFYSIHSLPPFWQAVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMLIALVVVGG 248

Query: 243 VAYYLISRGIGLR 255
           VA  ++  G  LR
Sbjct: 249 VALQMLRTGYKLR 261