Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 253 a.a., ABC-2 type transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  198 bits (504), Expect = 8e-56
 Identities = 92/249 (36%), Positives = 157/249 (63%)

Query: 8   AFKSILTKEINRFTRIWVQTLVPPAITMTLYFLIFGNLVGSRIGEMGGVSYMEFIAPGLI 67
           A ++I   E+ R  R  +Q+++ P I+ +LYF++FG  +GSRI E+ G+SY  FI PGLI
Sbjct: 5   AIRAIYKFEMARTWRTLMQSIIAPVISTSLYFVVFGAAIGSRIKEVDGISYGAFIVPGLI 64

Query: 68  MMSVITNSYSNVASSFYSAKFQRNLEELMVAPVPHYVMIAGYVGGGVARGLCVGLIVTLV 127
           M+S+++ S SN +   Y  +F   + EL+ APV +  ++  YVG    + + +GLI+   
Sbjct: 65  MLSLLSQSISNASFGIYFPRFTGTIYELLSAPVSYLEIVVSYVGAAATKSILLGLIILAT 124

Query: 128 AMFFVDISLHHAGLVVMTVFLTSVLFSLGGLINAVFAKSFDDISIIPTFVLTPLTYLGGV 187
           A  FV + + H   +++ + LT+V FSL G I  ++A SF+ + ++P  ++TPLT+LGG 
Sbjct: 125 AGLFVPLQVQHPFWMILFLVLTAVTFSLLGFIIGIWADSFEKLQLVPLLIITPLTFLGGS 184

Query: 188 FYSLSLLPAFWQGVSALNPVVYMINVFRYGFLGFADISVPLSIGIMVGFCAALWGVAYYL 247
           FY++++LP FW+ V+  NP+VY+++ FR+ F G AD++V +S+ +   F A    +  ++
Sbjct: 185 FYAVNMLPPFWKVVTLFNPIVYLVSGFRWSFYGLADVNVEVSLAMTALFLAVFLAIVAWI 244

Query: 248 ISRGIGLRS 256
              G  L+S
Sbjct: 245 FKTGYRLKS 253