Pairwise Alignments

Query, 1215 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., Outer membrane stress sensor protease DegS from Xanthomonas campestris pv. campestris strain 8004

 Score = 71.6 bits (174), Expect = 2e-16
 Identities = 52/132 (39%), Positives = 64/132 (48%), Gaps = 12/132 (9%)

Query: 347 PTTKVGKIEASIAGNTVTAVGAGFNKSNAYSFTNTVAPIVYPAANKNGCTA---YTEDLT 403
           P    GK E   A     A    F   +  +  + VA     A+  +GC         + 
Sbjct: 271 PAGAAGKFEVGFASFGPLASAGNFPARSVVTVDDGVAA----ASASDGCETPFVNAAAVA 326

Query: 404 GKTVLIDRGTCGFVVKVLNAQLKGASFVIVANNAANAGAFVMGGTD---DKITIPSVMVS 460
           GK  LIDRGTC F +KV NAQL GA  VIVANNA  AG   MG        ITIP++MVS
Sbjct: 327 GKVALIDRGTCAFAIKVKNAQLNGAVGVIVANNA--AGVQTMGNAAPPITDITIPAIMVS 384

Query: 461 KEDGDAIKTALA 472
           + DG  +K + A
Sbjct: 385 QADGARLKGSAA 396