Pairwise Alignments

Query, 1215 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1659 a.a., peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (260), Expect = 5e-26
 Identities = 107/417 (25%), Positives = 186/417 (44%), Gaps = 59/417 (14%)

Query: 238 VVGTAPDVELLVYSVCN----------SGCSGIAQLNALEASMDPNGDGDISDRVDTVNM 287
           + G AP   +++Y VC           +GC G A L A+        D  I+D VD +N 
Sbjct: 378 ISGVAPRANVIMYQVCYPGDGSFGDSYAGCKGSALLAAI--------DDAIADGVDVINY 429

Query: 288 SLGGDFGDVE-DGAVQVMINEMVQLGVNLVISAGN--------------DGPTPFVVGGP 332
           S+G  FG    D  +++      + G+++  SAGN              D  +P++    
Sbjct: 430 SIGTTFGTFPWDDPMELGFLAAREAGISVSASAGNSYMPQYASQARGAIDHFSPWLTSVA 489

Query: 333 STTNSALSV--GAMTHPTTKVGKIEASIAGNTVTAVGAG-FNKSNAYSFTNTVAPIVYPA 389
           +TT+  +    G M    T   +  +++ G+ +T    G   ++ AY     +    +PA
Sbjct: 490 ATTHGRVIAVEGKMLTNATGGDQPLSNLEGSGITEAYTGPVVEAKAYGSEYEMCNEPFPA 549

Query: 390 ANKNGCTAYTEDLTGKTVLIDRGTCGFVVKVLNAQLKGASFVIVAN----NAANAGAFVM 445
              +         T   V+  RG    V K +N Q  GA   I+ N    +  +   +V+
Sbjct: 550 GFFDADPEGNPYATAPIVVCKRGDIARVSKAVNVQAGGAGGFILWNPGYSDPTHNDPYVI 609

Query: 446 GGTDDKITIPSVMVSKEDGD-AIKTALASGD-----VAFSIASTELGTAGAIATFTSRGP 499
            G +  I   S   + ++G   +++ LA+G      +  S  ST+ GTA  +A F+SRGP
Sbjct: 610 PGIN--IDYGSYYGNSDNGYYGLQSWLAAGSGHTLTITASEVSTKEGTADYVADFSSRGP 667

Query: 500 SIGG--TLKPEITAPGTDILTAHP--------GLGEGLTPISGTSFSSPITAGAVSIIRE 549
           ++     + P + APG +I  A          G+      ISGTS ++P  AGA++++ +
Sbjct: 668 NLEAPDVMSPNLAAPGVNIYAAWADEMPFTTQGMPADYAAISGTSMAAPHVAGAMALLTQ 727

Query: 550 ALPHRNAFEVKATIMNAANLDVTLEPKEINP-DTELAPISYIGSGLVDVEKAINLPV 605
           A P     ++++ +M  A+L+     ++ NP D   A  S  GSG+++V +A N P+
Sbjct: 728 AHPDWTPAQIQSALMTTASLEGVTRARDGNPYDPVAAGFSDAGSGVINVSRANNAPL 784