Pairwise Alignments

Query, 1215 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1251 a.a., peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (281), Expect = 2e-28
 Identities = 191/877 (21%), Positives = 332/877 (37%), Gaps = 171/877 (19%)

Query: 484  ELGTAGAIATFTSRGPSIGG-TLKPEITA-----PGTDILTAHPGLGEGLTPISGTSFSS 537
            E G +  I  +   GP  G   LKPEI       P   I        + L   SG    +
Sbjct: 398  EDGESKVIPDWAPMGPVRGSQALKPEIVTFTDEQPVAKISNPDETAAK-LGSRSGAFTGA 456

Query: 538  PITAGAVSIIREALPHRNAFEVKATIMNAANLDVTLEPKEINPDTELAPISYIGSGLVDV 597
               A A ++I+   P     E+KA + N A++   LE   + P    A +  +G G+ ++
Sbjct: 457  ARIAAAAAVIKSQHPGFGPAEIKALLANTADISSILESDGVTP----AELYAMGHGVENL 512

Query: 598  EKAINLPVAAWNKDTKQAALAFGLLALNKTTSITKTVTVKNFSATEKTYTLKVDQRFQND 657
              AI  P+ AW   + Q  + FG+  + ++ ++ K +T++N S T +TY L   +   + 
Sbjct: 513  TNAIASPIVAWETSSNQPYVQFGMHEVAQSKTLHKRITLRNLSDTAQTYQLSY-KMTGDK 571

Query: 658  LDSGALSFALPASVTIPAGQTINFDVTATIDPTKLPEWSLTSSYELDGTAADASAALTLS 717
                AL+ +LP SV IPA  ++   +T TI   KLP+W L       GT     A L  +
Sbjct: 572  AGYQALTMSLPESVNIPAHSSVILPLTLTITGDKLPQWPLM------GTGDHVDANLKAT 625

Query: 718  EYDGAIQFMEGDVKALHLVYHVLPKAAAAISVETEVTE---------------------- 755
            E +G I     D   ++L + V  ++  +I+ +    E                      
Sbjct: 626  ELNGYISLSADDQPEINLGWMVKARSNTSITKKPNAIEYPNYLGYNPDLGKTEWEHLNWG 685

Query: 756  --------------DGLVRTLTNVGATSITDPFTAPLIATSP-----VDQSKRHDLLNAS 796
                           G V +  N   T+ T     PL+  +P     +   K H +    
Sbjct: 686  RELYPDTESGSLNYQGYVASFVNESNTATTYQ-AYPLLLQNPTLPEKLQGLKGHMIKAVG 744

Query: 797  SELLLSSSCD-TGIAIYNTLQMRDPIIHAL---------VASYDVDYDLN-NDGVWDYT- 844
              +   + C  TG  +   + +  P   AL         + +YD+ Y+    +  WD + 
Sbjct: 745  GAVYDDAQCSVTGKKLNIAVSLFQPADVALPNFFERGPRLFTYDLFYEATVKENGWDKSF 804

Query: 845  --------AATVNLDWFSTRDNPLPRSI---YGLVAKYGTSSGTLE----PVFHVTGNNF 889
                    A  VN  + +  D   P +      L   Y   +G  +    P F       
Sbjct: 805  EGAYIYDDAQKVNQPFVALNDKGQPTTYVIDLNLPYDYSNPTGRYKESTLPTFFANNGRN 864

Query: 890  LTSKVCLEDIGLAEAD--------LGKTIKV---------------------RYRVEDSD 920
            + S+VCLED+   E D         G  I+                       Y  E+S 
Sbjct: 865  IVSQVCLEDMFHHELDSVEDFDQNFGFHIETDRHTGKAQYEPITQFNPIKGGSYTTEESC 924

Query: 921  WAPIPSGDEDSVVASLVLD--------GSGTSAMLLDAKGNEVTELKPGESAILETKVGS 972
            +    SG+E  V +  V D        G     ++ D    +    +PGE   +   VG+
Sbjct: 925  YLDWFSGEE--VCSETVFDRSLKIGFAGKEDDQVVGDLAFEQTYTAQPGEEVYI-ASVGT 981

Query: 973  N----------AKGFMFLS---DSGSMSVVANTTDEGNS-APTVENLTLSVNKGTAAGSV 1018
            +           KGFM +S   D   +   A   D+G++ A        SV +    G+V
Sbjct: 982  SELGGFGRLPEPKGFMVVSLNDDFMQIGYNALVDDDGSAIAKAKAGQVFSVEENAEVGTV 1041

Query: 1019 LGQLKATDPDMLTSPFSEFVTLSSNSSMVVIAKDGTVR--------LSDNAVINQQSKTI 1070
            +G++        TS  S +     + +  ++     +          +  A+  + ++  
Sbjct: 1042 VGEIALDTQGFFTSGSSSYTAFELHITNTLVGTPFAINQETFELYVANPEALDFENNREF 1101

Query: 1071 EVEVIAL--DTMGNASTPAKVTVLINNTKP----------SVTPTNANATENSYVALLAN 1118
            EV++ +   +++G   T   +   IN+  P           V P +  +  ++   L  +
Sbjct: 1102 EVKITSQRGNSIGETETLTVMVQDINDMAPELNEAVAASLKVAPLSFKSGSSASFNLDVS 1161

Query: 1119 G--KDVDGDELTYTWTQTSGPSVSFVNGKDRIGFTAPAGENVYTFTVVASDGVDNSNVGT 1176
            G   D++G+ L+Y    +S  ++S ++G    G     G   +  T++ASDG    +  +
Sbjct: 1162 GLFTDMEGNGLSYQVEGSSFAALS-ISGTQITGQVDSEGS--HPLTIIASDG---EHEVS 1215

Query: 1177 STVTVKTAKSNNGGGTSGGALGWLTALLLPLAALRRR 1213
             T+ ++ +++       GGALGWL+ LL   A +RRR
Sbjct: 1216 HTLQIEASQAQE--SDDGGALGWLSLLLGLTAMVRRR 1250



 Score = 91.7 bits (226), Expect = 4e-22
 Identities = 104/416 (25%), Positives = 166/416 (39%), Gaps = 95/416 (22%)

Query: 2   KTKLSLAISAALLTSAAVAGTTAQYNTTNQTTDKYAGLSVTKNDSNEQKQAVAWMVKLKA 61
           K  L+L +S A+L+SA  A            T+  +   V      EQ Q  A      A
Sbjct: 5   KCTLALCVSTAILSSALQA-----------KTESISAFGV------EQAQTRATYTFSLA 47

Query: 62  PSLAQQSQLKGFNKQSVMSQIESSQTKVKNAITSMDADLKIVATTSKLVNSIIVEGNHKQ 121
            +    SQL     Q  ++Q    Q ++   I ++D   ++V ++  L N++ VE     
Sbjct: 48  QTDKAASQLSA---QDALNQ----QAQLLKQIQAIDPQARLVGSSHLLANTVTVEVQQDA 100

Query: 122 LVSLLNNAEVADIL---PIYDYKLDVAASAEYIKAKAVIDAGI-------------ASGK 165
           L  +     +A       ++  +  +A +   I ++                     +G 
Sbjct: 101 LAKIRALDAIAQTFHGEQLFSEQTSIAQARSRIASQEASPLSEQANELMSPYTGKETAGT 160

Query: 166 GQRVAVLDTGVDYTHKALGGSGLVAD-------------YKAAVAAKSEMPNWPQGKVIG 212
           G  +A++ TG+DYT    GGSG+  +              +A      E   +P   V G
Sbjct: 161 GVSIAIISTGIDYTLPIFGGSGVYGEDNDPETPPPAGSYLEALENGAIEYAGFPTDVVAG 220

Query: 213 GWDFVN----NDPNPID------------VTTNHGTHVSHSVVGTAPDVELLVYSVCN-- 254
           GWDFV+    ND NPID              T  GT ++  V   AP  +L  Y V N  
Sbjct: 221 GWDFVSENYGNDANPIDQNLEYEAYNGWVYPTGTGTEIASIVHQLAPGAKLHAYKVYNVM 280

Query: 255 --------SGCSGIAQLNALEASMDPNGDGDISDRVD--TVNMSLGGDFGDVEDGA---- 300
                   SG S  + ++A E +MDPN DGD SD +D   ++ +  G F D++  A    
Sbjct: 281 EKNGRVSASGPSLNSIVSAFEHAMDPNQDGDTSDHLDIALIDAAGAGAFFDIDGNASPSL 340

Query: 301 VQVMINEMVQLGVNLVISAGNDGPTPFV----------VGGPSTTNSALSVGAMTH 346
           +Q++I  +   G+ +V  AGN G               +    +  SA++VGA+ H
Sbjct: 341 LQMLIERVSAQGMTVVTHAGNLGLYSLFGDAEAKHRNWISSEGSATSAITVGAVNH 396