Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 457 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

 Score =  139 bits (351), Expect = 2e-37
 Identities = 128/448 (28%), Positives = 193/448 (43%), Gaps = 83/448 (18%)

Query: 18  RLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTFAHKYHA--- 74
           R ELL+PA        A  +GADAVY G P +  R    N+  D A L     + HA   
Sbjct: 6   RTELLSPAGTLKSMRYAFAYGADAVYAGQPRYSLRVR--NNEFDHANLKLGIDEAHALGK 63

Query: 75  QVFVALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQL---NLPPIALHASTQMD 131
           Q +V +N    + +L    K +  V   G DALI+ D G++ L   + P + +H S Q +
Sbjct: 64  QFYVVVNIAPHNAKLKTFIKDLEPVVAMGPDALIMSDPGLIMLVRQHFPQMTIHLSVQAN 123

Query: 132 NRNPEKVAFLEQVGFSQVVLARELGLSQIREVAAHT-NMQIEFFIHGALCVAYSGLCNLS 190
             N   V F E  G S+V+L+REL L +I E+      M++E F+HGALC+AYSG C LS
Sbjct: 124 AVNWATVKFWESQGVSRVILSRELSLEEIGEIREQVPGMELEVFVHGALCMAYSGRCLLS 183

Query: 191 HAFSNRSANRGECSQMCRLPGNLKTRQ------GDVLAKNE------------------- 225
              + R  N+G C+  CR     KT +      GD++ K E                   
Sbjct: 184 GYINKRDPNQGSCTNACR--WEYKTHEAKENEIGDIVHKYEPIAVQPAEPVRSEPTLGVG 241

Query: 226 ----------------------------HLLSLKDNNQTDNLEALIDAGVRSFKIEGRLK 257
                                       ++++ KD     ++E L+  GV S KIEGR K
Sbjct: 242 APTDEVFLLEDSSRPGEFMSAFEDEHGTYIMNSKDLRAVQHVERLVQMGVHSLKIEGRTK 301

Query: 258 DLSYVKNVTAHYRQKLDAIMARRPEFVASSHGRTEHTFTPDPEKTFNRGSTDYF----VH 313
              YV      YR+ +D  +A RP          + +     E   +RG T+ F    VH
Sbjct: 302 SHYYVARTAQVYRKAIDDALAGRP---------FDKSLMDTLESLAHRGYTEGFLRRHVH 352

Query: 314 ERSQGIKDFRSPKYIGQDVGKVVAIGKD-FIQVSSTHEFNNGDGLAYFPP----NYAMAK 368
           +  Q  +   S     Q VG++    ++   +V+  + F  GD L    P    N  + +
Sbjct: 353 DEYQNYERGFSLSERQQFVGELTGERRNGLAEVTVKNRFAVGDKLELMTPQGNLNLRLEQ 412

Query: 369 QSDDKLQGLRVNRAEGHKLHVLQVPRDL 396
             + + + + V   +GH ++ L VP D+
Sbjct: 413 LENKRGEAIEVAPGDGHTVY-LAVPEDV 439